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View Structure Prediction Details

Protein: NPR1_ARATH
Organism: Arabidopsis thaliana
Length: 593 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|115951930 - gi|115951930|ref|XP_001184056.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
583.0 [0..3] [590..258]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP  60
   61 DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK EKDSNNTAAV KLELKEIAKD 120
  121 YEVGFDSVVT VLAYVYSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.09691
Match: 2nn2A
Description: No description for 2nn2A was found.

Predicted Domain #2
Region A:
Residues: [139-593]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVRPPPKGVS ECADENCCHV ACRPAVDFML EVLYLAFIFK IPELITLYQR HLLDVVDKVV  60
   61 IEDTLVILKL ANICGKACMK LLDRCKEIIV KSNVDMVSLE KSLPEELVKE IIDRRKELGL 120
  121 EVPKVKKHVS NVHKALDSDD IELVKLLLKE DHTNLDDACA LHFAVAYCNV KTATDLLKLD 180
  181 LADVNHRNPR GYTVLHVAAM RKEPQLILSL LEKGASASEA TLEGRTALMI AKQATMAVEC 240
  241 NNIPEQCKHS LKGRLCVEIL EQEDKREQIP RDVPPSFAVA ADELKMTLLD LENRVALAQR 300
  301 LFPTEAQAAM EIAEMKGTCE FIVTSLEPDR LTGTKRTSPG VKIAPFRILE EHQSRLKALS 360
  361 KTVELGKRFF PRCSAVLDQI MNCEDLTQLA CGEDDTAEKR LQKKQRYMEI QETLKKAFSE 420
  421 DNLELGNSSL TDSTSSTSKS TGGKRSNRKL SHRRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.045757
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle