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View Structure Prediction Details

Protein: NAS3_ARATH
Organism: Arabidopsis thaliana
Length: 320 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAS3_ARATH.

Description E-value Query
Range
Subject
Range
gi|40782199 - gi|40782199|emb|CAE45015.1| putative nicotianamine synthase [Arabidopsis halleri subsp. halleri]
300.0 [0..1] [320..1]

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Predicted Domain #1
Region A:
Residues: [1-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE  60
   61 IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY YNNYLKLGKL EFDLLEQNLN 120
  121 GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF 180
  181 FHTVDIMDVT ESLKSFDVVF LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF 240
  241 LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH 300
  301 AKMNKNMMIE EFGAREEQLS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 1qzzA
Description: Crystal structure of aclacinomycin-10-hydroxylase (RdmB) in complex with S-adensyl-L-methionine (SAM)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle