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View Structure Prediction Details

Protein: CADH8_ARATH
Organism: Arabidopsis thaliana
Length: 359 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CADH8_ARATH.

Description E-value Query
Range
Subject
Range
gi|40795502 - gi|40795502|gb|AAR91477.1| thermostable alcohol dehydrogenase [Geobacillus sp. M10EXG]
325.0 [0..9] [351..1]

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Predicted Domain #1
Region A:
Residues: [1-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKVLQKEAF GLAAKDNSGV LSPFSFTRRE TGEKDVRFKV LFCGICHSDL HMVKNEWGMS  60
   61 TYPLVPGHEI VGVVTEVGAK VTKFKTGEKV GVGCLVSSCG SCDSCTEGME NYCPKSIQTY 120
  121 GFPYYDNTIT YGGYSDHMVC EEGFVIRIPD NLPLDAAAPL LCAGITVYSP MKYHGLDKPG 180
  181 MHIGVVGLGG LGHVGVKFAK AMGTKVTVIS TSEKKRDEAI NRLGADAFLV SRDPKQIKDA 240
  241 MGTMDGIIDT VSATHSLLPL LGLLKHKGKL VMVGAPEKPL ELPVMPLIFE RKMVMGSMIG 300
  301 GIKETQEMID MAGKHNITAD IELISADYVN TAMERLEKAD VRYRFVIDVA NTLKPNPNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.69897
Match: 1yqdA
Description: Sinapyl Alcohol Dehydrogenase complexed with NADP+
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle