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View Structure Prediction Details

Protein: MPPA2_ARATH
Organism: Arabidopsis thaliana
Length: 499 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MPPA2_ARATH.

Description E-value Query
Range
Subject
Range
MPPB_MOUSE - Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=1 SV=1
437.0 [0..19] [499..3]

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Predicted Domain #1
Region A:
Residues: [1-499]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRTAASRAK ALKGILNHNF RASRYASSSA VATSSSSSSW LSGGYSSSLP SMNIPLAGVS  60
   61 LPPPLSDHVE PSKLKTTTLP NGLTIATEMS PNPAASIGLY VDCGSIYETP QFRGATHLLE 120
  121 RMAFKSTLNR SHFRLVREIE AIGGNTSASA SREQMGYTID ALKTYVPEMV EVLIDSVRNP 180
  181 AFLDWEVNEE LRKVKVEIGE FATNPMGFLL EAVHSAGYSG ALANPLYAPE SAITGLTGEV 240
  241 LENFVFENYT ASRMVLAASG VDHEELLKVV EPLLSDLPNV PRPAEPKSQY VGGDFRQHTG 300
  301 GEATHFALAF EVPGWNNEKE AIIATVLQML MGGGGSFSAG GPGKGMHSWL YLRLLNQHQQ 360
  361 FQSCTAFTSV FNNTGLFGIY GCTSPEFASQ GIELVASEMN AVADGKVNQK HLDRAKAATK 420
  421 SAILMNLESR MIAAEDIGRQ ILTYGERKPV DQFLKTVDQL TLKDIADFTS KVITKPLTMA 480
  481 TFGDVLNVPS YDSVSKRFR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 1sqbA
Description: Crystal Structure Analysis of Bovine Bc1 with Azoxystrobin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle