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View Structure Prediction Details

Protein: MLO8_ARATH
Organism: Arabidopsis thaliana
Length: 593 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLO8_ARATH.

Description E-value Query
Range
Subject
Range
gi|25346302 - gi|25346302|pir||F84552 similar to Mlo proteins from H. vulgare [imported] - Arabidopsis thaliana
784.0 [0..1] [593..1]
gi|60617257 - gi|60617257|gb|AAX31277.1| MLO1 [Capsicum annuum]
764.0 [0..27] [586..1]
gi|14334167 - gi|14334167|gb|AAK60566.1|AF384144_1 MLo protein [Triticum aestivum]
748.0 [0..30] [581..2]
gi|15290605, gi|... - gi|218192015|gb|EEC74442.1| hypothetical protein OsI_09833 [Oryza sativa Indica Group], gi|15290605|...
747.0 [0..27] [581..1]
gi|108705991, gi... - gi|6063540|dbj|BAA85400.1| unnamed protein product [Oryza sativa Japonica Group], gi|50948903|ref|XP...
745.0 [0..27] [581..1]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIIDGSLLR RLICLCLWCL LGGGVTVVTA EDEKKVVHKQ LNQTPTWAVA AVCTFFIVVS  60
   61 VLLEKLLHKV GKVLWDRHKT ALLDALEKIK AELMVLGFIS LLLTFGQTYI LDICIPSHVA 120
  121 RTMLPCPAPN LKKEDDDNGE SHRRLLSFEH RFLSGGEASP T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [162-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KCTKEGYVEL ISAEALHQLH ILIFFLAIFH VLYSFLTMML GRLKIRGWKH WENETSSHNY  60
   61 EFSTDTSRFR LTHETSFVRA HTSFWTRIPF FFYVGCFFRQ FFRSVGRTDY LTLRNGFIAV 120
  121 HLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.825 N/A N/A a.159.4 Description not found.

Predicted Domain #3
Region A:
Residues: [285-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGSQFNFQKY IKRSLEDDFK VVVGVSPVLW GSFVLFLLLN IDGFKMMFIG TAIPVIIILA  60
   61 VGTKLQAIMT RMALGITD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [363-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHAVVQGMPL VQGNDEYFWF GRPHLILHLM HFALFQNAFQ ITYFFWIWYS FGSDSCYHPN  60
   61 FKIALVKVAI ALGVLCLCSY ITLPLYALVT QMGSRMKKSV FDEQTSKALK KWRMAVKKKK 120
  121 GVKATTKRLG GDGSASPTAS TVRSTSSVRS L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [514-593]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRYKTTPHSM RYEGLDPETS DLDTDNEALT PPKSPPSFEL VVKVEPNKTN TGETSRDTET  60
   61 DSKEFSFVKP APSNESSQDR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle