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View Structure Prediction Details

Protein: MLO5_ARATH
Organism: Arabidopsis thaliana
Length: 501 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLO5_ARATH.

Description E-value Query
Range
Subject
Range
gi|14091580 - gi|14091580|gb|AAK53798.1|AF369566_1 membrane protein Mlo5 [Arabidopsis thaliana]
821.0 [0..14] [501..14]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGGGSTS GEGPRELDQT PTWAVSTVCG VIILISIVLE LMIHKIGEVF TERRKKALYE  60
   61 ALQKIKNELM VLGFISLLLT FGQNYIASLC VASRYGHAMS FCGPYDGPSG ESKKPKTTEH 120
  121 LERRVLADAA PAQC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKGYVPLISL NALHQVHIFI FFLAVFHVIY SAITMMLGRA KIRGWKVWEE EVINDHEMMN  60
   61 DPSRFRLTHE TSFVREHVNP WAKNRFSFYV MCFFRQMLRS VRKSDYLTMR HGFISVHLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [254-501]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGMKFNFQKY IKRSLEDDFK VVVGISPELW AFVMLFLLFD VHGWYVTAVI TMIPPLLTLA  60
   61 IGTKLQAIIS DMALEIQERH AVIQGMPLVN VSDRHFWFSR PALVLHIIHF ILFQNAFEIT 120
  121 YFFWIWYEFG LRSCFHHHFA LIIIRVALGV GVQFLCSYIT LPLYALVTQM GSTMKRSVFD 180
  181 DQTSKALKNW HKNAKKKSET PGQTQPPLPN LRPKTGGDIE SASPANITAS VDVKESDQSQ 240
  241 SRDLLSGP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle