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View Structure Prediction Details

Protein: MLO11_ARATH
Organism: Arabidopsis thaliana
Length: 573 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLO11_ARATH.

Description E-value Query
Range
Subject
Range
MLO12_ARATH - MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO12 PE=2 SV=2
738.0 [0..14] [562..4]
gi|60617257 - gi|60617257|gb|AAX31277.1| MLO1 [Capsicum annuum]
714.0 [0..11] [563..3]
gi|87241204 - gi|87241204|gb|ABD33062.1| Mlo-related protein [Medicago truncatula]
710.0 [0..11] [565..3]
gi|15290605, gi|... - gi|218192015|gb|EEC74442.1| hypothetical protein OsI_09833 [Oryza sativa Indica Group], gi|15290605|...
702.0 [0..11] [501..3]
gi|108705991, gi... - gi|6063540|dbj|BAA85400.1| unnamed protein product [Oryza sativa Japonica Group], gi|50948903|ref|XP...
702.0 [0..11] [501..3]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEGEENGNE ADSNERSLAL SPTWSVAIVL TVFVVVSLIV ERSIYRLSTW LRKTKRKPMF  60
   61 AALEKMKEEL MLLGFISLLL TATSSTIANI CVPSSFYNDR FLPCTRSEIQ EELESGSTVK 120
  121 RNLLTKSLFF NIFRRRLDVI KRTTC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [146-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGHEPFVSY EGLEQLHRFI FIMAVTHVTY SCLTMLLAIV KIHSWRIWED VARLDRHDCL  60
   61 TAVAREKIFR RQTTFVQYHT SAPLAKNRIL IWVTCFFRQF GRSVDRSDYL TLRKGFIVN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.767 N/A N/A a.61.1 Retroviral matrix proteins
View Download 0.767 N/A N/A a.61.1 Retroviral matrix proteins
View Download 0.720 N/A N/A d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain
View Download 0.720 N/A N/A d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain
View Download 0.685 N/A N/A a.77.1 DEATH domain
View Download 0.685 N/A N/A a.77.1 DEATH domain
View Download 0.645 N/A N/A a.7.6 Ribosomal protein S20
View Download 0.592 N/A N/A a.1.1 Globin-like
View Download 0.583 N/A N/A a.60.9 lambda integrase-like, N-terminal domain
View Download 0.387 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.365 N/A N/A a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.347 N/A N/A a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.323 N/A N/A a.159.4 Description not found.
View Download 0.315 N/A N/A d.87.2 CO dehydrogenase flavoprotein C-terminal domain-like

Predicted Domain #3
Region A:
Residues: [265-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HHLTLKYDFH SYMIRSMEEE FQRIVGVSGP LWGFVVAFML FNIKGSNLYF WIAIIPVTLV  60
   61 LLVGAKLQHV IATLALENAG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [345-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTEYPSGVKL RPRDELFWFN KPELLLSLIH FILFQNSFEL ASFFWFWWQF GYSSCFLKNH  60
   61 YLVYFRLLLG FAGQFLCSYS TLPLYALVTQ MGTNYKAALI PQRIRETIRG WGKATRRKRR 120
  121 HGLYGDDSTV RTETS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [480-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIASLEEYDH QVLDVTETSF EQQRKQQEQG TTELELQPIQ PRNDCVPNDT SSRVGTPLLR  60
   61 PWLSISSPTT TIELRSEPME TLSRSSSLPS EKRV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.243 a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.243 a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.204 a.39.1 EF-hand


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle