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View Structure Prediction Details

Protein: METK2_ARATH
Organism: Arabidopsis thaliana
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for METK2_ARATH.

Description E-value Query
Range
Subject
Range
METK_GEOKA - S-adenosylmethionine synthase OS=Geobacillus kaustophilus (strain HTA426) GN=metK PE=3 SV=1
METK_GEOKA - S-adenosylmethionine synthase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1
674.0 [0..2] [393..4]

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Predicted Domain #1
Region A:
Residues: [1-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK  60
   61 ATIDYEKIVR DTCRSIGFIS DDVGLDADKC KVLVNIEQQS PDIAQGVHGH FTKRPEDIGA 120
  121 GDQGHMFGYA TDETPELMPL SHVLATKIGA RLTEVRKNGT CRWLRPDGKT QVTVEYYNDN 180
  181 GAMVPVRVHT VLISTQHDET VTNDEIARDL KEHVIKPIIP EKYLDDKTIF HLNPSGRFVI 240
  241 GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR 300
  301 RALVQVSYAI GVPEPLSVFV DTYGTGLIPD KEILKIVKET FDFRPGMMTI NLDLKRGGNG 360
  361 RFQKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1fugA
Description: S-adenosylmethionine synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
methionine adenosyltransferase activity 8.00759843092519 bayes_pls_golite062009
transferase activity 1.78879119839291 bayes_pls_golite062009
binding 1.70779292877479 bayes_pls_golite062009
catalytic activity 1.59111295908728 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 1.11999094477144 bayes_pls_golite062009
protein binding 0.298204436433395 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle