| Protein: | MEM12_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 219 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MEM12_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
144.0 | [0..6] | [218..488] |
|
Region A: Residues: [1-219] |
1 11 21 31 41 51
| | | | | |
1 MASGTVGGLS EVYSSAKRIL LRARNGIEKL ERFDSDPTDL ASSVKRDITE VQSLCSNMDG 60
61 LWRSIPVKSQ RDLWRRKSEQ VGEEAEYLNQ SLEKYMWRNQ RKMLEAKERA DLLGRGSGEG 120
121 AHILQIFDEE AQGMNSVKNS KRMLEDSFQS GVAILSKYAE QRDRLKSAQR KALDVLNTVG 180
181 LSNSVLRLIE RRNRVDTWIK YAGMIATLVI LYLFIRWTR
|
| Detection Method: |  |
| Confidence: | 7.30103 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| binding | 1.8951551921267 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| protein binding | 1.63976398283458 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| protein transporter activity | 1.35810492956056 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| SNARE binding | 1.11364909435982 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
