| Protein: | LYM2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 350 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LYM2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..1] | [345..1] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 METSCFTLLG LLVSLSFFLT LSAQMTGNFN CSGSTSTCQS LVGYSSKNAT TLRNIQTLFA 60
61 VKNLRSILGA NNLPLNTSRD QRVNPNQVVR VPIHCS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.220 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
|
Region A: Residues: [97-159] |
1 11 21 31 41 51
| | | | | |
1 CSNGTGVSNR DIEYTIKKDD ILSFVATEIF GGLVTYEKIS EVNKIPDPNK IEIGQKFWIP 60
61 LPC
|
| Detection Method: | |
| Confidence: | 3.35 |
| Match: | 2djpA |
| Description: | No description for 2djpA was found. |
|
Region A: Residues: [160-231] |
1 11 21 31 41 51
| | | | | |
1 SCDKLNGEDV VHYAHVVKLG SSLGEIAAQF GTDNTTLAQL NGIIGDSQLL ADKPLDVPLK 60
61 ACSSSVRKDS LD
|
| Detection Method: | |
| Confidence: | 3.154902 |
| Match: | 1y7mA |
| Description: | Crystal Structure of the B. subtilis YkuD protein at 2 A resolution |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [232-350] |
1 11 21 31 41 51
| | | | | |
1 APLLLSNNSY VFTANNCVKC TCDALKNWTL SCQSSSEIKP SNWQTCPPFS QCDGALLNAS 60
61 CRQPRDCVYA GYSNQTIFTT ASPACPDSAG PDNYASTLSS SFNFVIVLIQ CALLCLCLL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.542 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.361 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.347 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.307 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.307 | N/A | N/A | c.55.4 | Translational machinery components |
