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View Structure Prediction Details

Protein: LONP2_ARATH
Organism: Arabidopsis thaliana
Length: 888 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for LONP2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-663]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD  60
   61 DAEGSSIGTM INPGAGSDSG ERSLKFLVGT TDAQKSDAKD QQDLQWHTRG VAARALHLSR 120
  121 GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKAELEQV KQDPDFVALS 180
  181 RQFKTTAMEL VSVLEQKQKT GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL 240
  241 KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED 300
  301 DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWDKASEE 360
  361 HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR GPVLCFVGPP GVGKTSLASS 420
  421 IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT 480
  481 GSDVRGDPAS ALLEVLDPEQ NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL 540
  541 IELPGYTQEE KLKIAMRHLI PRVLDQHGLS SEFLKIPEAM VKNIIQRYTR EAGVRSLERN 600
  601 LAALARAAAV MVAEHEQSLP LSKDVQKLTS PLLNGRMAEG GEVEMEVIPM GVNDHEIGGT 660
  661 FQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 112.0
Match: 1qvrA
Description: Crystal Structure Analysis of ClpB
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [664-888]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSALVVDETM LEKILGPPRF DDSEAADRVA SAGVSVGLVW TTFGGEVQFV EATSMVGKGE  60
   61 MHLTGQLGDV IKESAQLALT WVRARASDFK LALAGDMNVL DGRDIHIHFP AGAVPKDGPS 120
  121 AGVTLVTALV SLFSQKRVRA DTAMTGEMTL RGLVLPVGGI KDKILAAHRY GIKRVILPQR 180
  181 NSKDLVEVPA AVLSSLEVIL AKRMEDVLEN AFEGGCPWRN NYSKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.154902
Match: 1rr9A
Description: Catalytic domain of E.coli Lon protease
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle