| Protein: | LBD28_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 198 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LBD28_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
227.0 | [0..8] | [189..34] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MMFHQMDKIS TPCAACKHLR RKCTEDCVFA PYFPSTKLDN YEAVHKVFGA SHVATLINSL 60
61 HPCQREFAMD TLAWEAQVQA NDPVNGCLGI IYNLLSQIKD LEEQLAIVKN ELASYCIVPT 120
121 FVP
|
| Detection Method: |  |
| Confidence: | 60.568636 |
| Match: | PF03195.5 |
| Description: | No description for PF03195.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.735 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.503 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.463 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.463 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.443 | N/A | N/A | a.7.1 | Spectrin repeat |
|
Region A: Residues: [124-198] |
1 11 21 31 41 51
| | | | | |
1 PPSMTNLEMH NNPMMIPEHT PNNGGCLTGQ QLYNEAQRFA STQSAQMQET QMQHDEESYR 60
61 DKSSYQKFGP CFNLH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.600 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.457 | N/A | N/A | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.366 | N/A | N/A | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.333 | N/A | N/A | a.28.1 | ACP-like |
| View | Download | 0.266 | N/A | N/A | a.3.1 | Cytochrome c |
