| Protein: | LBD18_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 262 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LBD18_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
273.0 | [0..1] | [262..1] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MSGGGNTITA VGGGGGGCGG GGSSGGGGSS GGGGGGPCGA CKFLRRKCVP GCIFAPYFDS 60
61 EQGSAYFAAV HKVFGASNVS KLLLHIPVHR RSDAVVTICY EAQARIRDPI YGCVAHIFAL 120
121 QQQVVNLQAE VSYLQAHLAS LELPQPQTRP QPMPQPQP
|
| Detection Method: |  |
| Confidence: | 67.337242 |
| Match: | PF03195.5 |
| Description: | No description for PF03195.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.597 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.514 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.489 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.466 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.448 | N/A | N/A | a.29.2 | Bromodomain |
|
Region A: Residues: [159-262] |
1 11 21 31 41 51
| | | | | |
1 LFFTPPPPLA ITDLPASVSP LPSTYDLASI FDQTTSSSAW ATQQRRFIDP RHQYGVSSSS 60
61 SSVAVGLGGE NSHDLQALAH ELLHRQGSPP PAATDHSPSR TMSR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
