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View Structure Prediction Details

Protein: K125_ARATH
Organism: Arabidopsis thaliana
Length: 1056 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for K125_ARATH.

Predicted Domain #1
Region A:
Residues: [1-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRHDKEKG VNVQVLLRCR PFSDDELRSN APQVLTCNDL QREVAVSQNI AGKHIDRVFT  60
   61 FDKVFGPSAQ QKDLYDQAVV PIVNEVLEGF NCTIFAYGQT GTGKTYTMEG ECRRSKSAPC 120
  121 GGLPAEAGVI PRAVKQIFDT LEGQQAEYSV KVTFLELYNE EITDLLAPED LSRVAAEEKQ 180
  181 KKPLPLMEDG KGGVLVRGLE EEIVTSANEI FTLLERGSSK RRTAETFLNK QSSRSHSLFS 240
  241 ITIHIKEATP EGEELIKCGK LNLVDLAGSE NISRSGARDG RAREAGEINK SLLTLGRVIS 300
  301 ALVEHLGHVP YRDSKLTRLL RDSLGGRTKT CIIATVSPAV HCLEETLSTL DYAHRAKNIR 360
  361 NKPEVNQKMM KSTLIKDLYG EIERLKAEVY ASRE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.30103
Match: 1q0bA
Description: Crystal structure of the motor protein KSP in complex with ADP and monastrol
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [395-1056]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNGVYMPKER YYQEESERKV MAEQIEQMGG QIENYQKQLE ELQDKYVGQV RECSDLTTKL  60
   61 DITEKNLSQT CKVLASTNEE LKKSQYAMKE KDFIISEQKK SENVLVQQAC ILQSNLEKAT 120
  121 KDNSSLHQKI GREDKLSADN RKVVDNYQVE LSEQISNLFN RVASCLSQQN VHLQGVNKLS 180
  181 QSRLEAHNKA ILEMKKKVKA SRDLYSSHLE AVQNVVRLHK ANANACLEEV SALTTSSACS 240
  241 IDEFLASGDE TTSSLFDELQ SALSSHQGEM ALFARELRQR FHTTMEQTQE MSEYTSTFFQ 300
  301 KLMEESKNAE TRAAEANDSQ INSIIDFQKT YEAQSKSDTD KLIADLTNLV SSHIRRQHEL 360
  361 VDSRLHNFKD AVSSNKTFLD EHVSAVNNLT KDAKRKWETF SMQAENEARE GADFSAAKHC 420
  421 RMELLLQQSV GHAESAFKHC KITHESLKEM TSKQVTDVSS LVRSACDSNE QHDAEVDSAR 480
  481 TAAEKDVTKN SDDIIQQIER MSEDEKASVS KILENVRSHE KTLESFQQDQ CCQARCIEDK 540
  541 AQETFQQQYM EYEPTGATPT KNEPEIPTKA TIESLRAMPI ETLVEEFREN NSYESFATKE 600
  601 TKPQQLTRSP LSQLKFSYSN RSSQRRFVLL LHNANLGPFL VMMVCDMCMH IPLDHFLYMT 660
  661 QP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.221849
Match: 2dfsA
Description: No description for 2dfsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle