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View Structure Prediction Details

Protein: IRT1_ARATH
Organism: Arabidopsis thaliana
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IRT1_ARATH.

Description E-value Query
Range
Subject
Range
ZIP8_ARATH - Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1
271.0 [0..1] [339..8]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTIFLVLIF VSFAISPATS TAPEECGSES ANPCVNKAKA LPLKVIAIFV ILIASMIGVG  60
   61 APLFSRNVSF LQPDGNIFTI IKCFASGIIL GTGFMHVLPD SFEMLSSICL EENPWHKFPF 120
  121 SGFLAMLSGL ITLAIDSMAT SLYTSKNAVG IMPHGHGH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHGPANDVTL PIKEDDSSNA QLLRYRVIAM VLELGIIVHS VVIGLSLGAT SDTCTIKGLI  60
   61 AALCFHQMFE GMGLGGCILQ AEYTNMKKFV MAFFFAVTTP FGIALGIALS TVYQDNSPKA 120
  121 LITVGLLNAC SAGLLIYMAL VDLLAAEFMG PKLQGSIKMQ FKCLIAALLG CGGMSIIAKW 180
  181 A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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