| Protein: | EIF3C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 900 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EIF3C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
903.0 | [0..1] | [900..1] |
|
|
832.0 | [0..1] | [900..1] |
|
|
802.0 | [0..1] | [900..1] |
|
|
774.0 | [0..3] | [840..109] |
|
|
773.0 | [0..1] | [899..1] |
|
|
744.0 | [0..3] | [840..2] |
|
|
734.0 | [0..3] | [840..2] |
|
Region A: Residues: [1-294] |
1 11 21 31 41 51
| | | | | |
1 MTSRFFTQVG SESEDESDYE VEVNEVQNDD VNNRYLQSGS EDDDDTDTKR VVKPAKDKRF 60
61 EEMTYTVDQM KNAMKINDWV SLQENFDKVN KQLEKVMRIT EAVKPPTLYI KTLVMLEDFL 120
121 NEALANKEAK KKMSTSNSKA LNSMKQKLKK NNKLYEDDIN KYREAPEVEE EKQPEDDDDD 180
181 DDDDDEVEDD DDSSIDGPTV DPGSDVDEPT DNLTWEKMLS KKDKLLEKLM NKDPKEITWD 240
241 WVNKKFKEIV AARGKKGTAR FELVDQLTHL TKIAKTPAQK LEILFSVISA QFDV
|
| Detection Method: |  |
| Confidence: | 9.30103 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [295-490] |
1 11 21 31 41 51
| | | | | |
1 NPGLSGHMPI NVWKKCVLNM LTILDILVKY SNIVVDDTVE PDENETSKPT DYDGKIRVWG 60
61 NLVAFLERVD TEFFKSLQCI DPHTREYVER LRDEPMFLAL AQNIQDYFER MGDFKAAAKV 120
121 ALRRVEAIYY KPQEVYDAMR KLAELVEEEE ETEEAKEESG PPTSFIVVPE VVPRKPTFPE 180
181 SSRAMMDILV SLIYRN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [491-583] |
1 11 21 31 41 51
| | | | | |
1 GDERTKARAM LCDINHHALM DNFVTARDLL LMSHLQDNIQ HMDISTQILF NRTMAQLGLC 60
61 AFRAGMITES HSCLSELYSG QRVRELLAQG VSQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [584-800] |
1 11 21 31 41 51
| | | | | |
1 SRYHEKTPEQ ERMERRRQMP YHMHLNLELL EAVHLICAML LEVPNMAANS HDAKRRVISK 60
61 NFRRLLEISE RQAFTAPPEN VRDHVMAATR ALTKGDFQKA FEVLNSLEVW RLLKNRDSIL 120
121 DMVKDRIKEE ALRTYLFTYS SSYESLSLDQ LAKMFDVSEP QVHSIVSKMM INEELHASWD 180
181 QPTRCIVFHE VQHSRLQSLA FQLTEKLSIL AESNERA
|
| Detection Method: | |
| Confidence: | 40.60206 |
| Match: | PF01399.19 |
| Description: | No description for PF01399.19 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [801-900] |
1 11 21 31 41 51
| | | | | |
1 MESRTGGGGL DLSSRRRDNN QDYAGAASGG GGYWQDKANY GQGRQGNRSG YGGGRSSGQN 60
61 GQWSGQNRGG GYAGRVGSGN RGMQMDGSSR MVSLNRGVRT
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
