| Protein: | EIF3D_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 591 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EIF3D_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
905.0 | [0..1] | [591..1] |
|
|
845.0 | [0..4] | [568..11] |
|
|
832.0 | [0..4] | [548..2] |
|
|
832.0 | [0..4] | [548..2] |
|
|
832.0 | [0..4] | [548..2] |
|
|
831.0 | [0..4] | [548..2] |
|
|
830.0 | [0..4] | [548..2] |
|
|
829.0 | [0..4] | [548..2] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MVTEAFEFVA VPFNSDGWGP PDASDVSSSA SPTSVAAANL LPNVPFASFS RSDKLGRVAD 60
61 WTRN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.610 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.610 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.476 | N/A | N/A | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.420 | N/A | N/A | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.407 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.338 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.335 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.264 | N/A | N/A | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.219 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
|
Region A: Residues: [65-177] |
1 11 21 31 41 51
| | | | | |
1 LSNPSARPNT GSKSDPSAVF DFSAFAIDEG FGLASSGGNP DEDAAFRLVD GKPPPRPKFG 60
61 PKWRFNPHHN RNQLPQRRDE EVEAKKRDAE KERARRDRLY NNNRNNIHHQ RRE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.207 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.202 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.201 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.201 | a.35.1 | lambda repressor-like DNA-binding domains |
|
Region A: Residues: [178-386] |
1 11 21 31 41 51
| | | | | |
1 AAAFKSSVDI QPEWNMLEQI PFSTFSKLSY TVQEPEDLLL CGGLEYYNRL FDRITPKNER 60
61 RLERFKNRNF FKVTTSDDPV IRRLAKEDKA TVFATDAILA ALMCAPRSVY SWDIVIQRVG 120
121 NKLFFDKRDG SQLDLLSVHE TSQEPLPESK DDINSAHSLG VEAAYINQNF SQQVLVRDGK 180
181 KETFDEANPF ANEGEEIASV AYRYRRWKL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [387-475] |
1 11 21 31 41 51
| | | | | |
1 DDNMHLVARC ELQSVADLNN QRSFLTLNAL NEFDPKYSGV DWRQKLETQR GAVLATELKN 60
61 NGNKLAKWTA QALLANADMM KIGFVSRVH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.626 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.561 | d.15.1 | Ubiquitin-like |
| View | Download | 0.549 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.549 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.544 | a.64.1 | Saposin |
| View | Download | 0.542 | d.15.1 | Ubiquitin-like |
| View | Download | 0.542 | d.15.1 | Ubiquitin-like |
| View | Download | 0.535 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.485 | d.15.4 | 2Fe-2S ferredoxin-like |
|
Region A: Residues: [476-591] |
1 11 21 31 41 51
| | | | | |
1 PRDHFNHVIL SVLGYKPKDF AGQINLNTSN MWGIVKSIVD LCMKLSEGKY VLVKDPSKPQ 60
61 VRIYEVPPDA FENDYVEEPL PEDEQVQPTE ENTEGAEASV AATKETEEKK ADDAQA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.604 | N/A | N/A | d.109.3 | Description not found. |
| View | Download | 0.587 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.558 | N/A | N/A | d.110.10 | Description not found. |
| View | Download | 0.508 | N/A | N/A | d.110.10 | Description not found. |
| View | Download | 0.507 | N/A | N/A | d.109.3 | Description not found. |
| View | Download | 0.497 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.472 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.450 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.440 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.392 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.380 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.350 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.336 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.334 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.321 | N/A | N/A | d.110.4 | SNARE-like |
