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View Structure Prediction Details

Protein: EIF3H_ARATH
Organism: Arabidopsis thaliana
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EIF3H_ARATH.

Description E-value Query
Range
Subject
Range
gi|218194711 - gi|218194711|gb|EEC77138.1| hypothetical protein OsI_15576 [Oryza sativa Indica Group]
gi|50923675, gi|... - gi|50923675|ref|XP_472198.1| OSJNBb0006N15.13 [Oryza sativa (japonica cultivar-group)], gi|38346118|...
300.0 [0..11] [337..21]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATMARSFLQ AISKDEAVAP PLRVVQIEGL AVLKIIKHCK EFSPTLVTGQ LLGLDVGSVL  60
   61 EVTNCFPFPV RDDDEEIEAD GANYQLEMMR CLREVNVDNN TVGWYQSTVL GSYQTVELIE 120
  121 TFMNYQENIK RCVCIIYDPS KADLGVLALK ALKLSDSFME LYRGGNFTGE KLREKNFSWM 180
  181 DIFEEIPIKV SNSALVSAFM TELETDTPVS QGDYDRLHSS T

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.39794
Match: 2o95A
Description: No description for 2o95A was found.

Predicted Domain #2
Region A:
Residues: [222-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPFLENNMEF LIKCMDDLSM EQQKFQYYYR NLSRQQAQQQ AWLQKRRTEN MARKSAGEEP  60
   61 LPEEDPSNPI FKAIPEPSRL ESFLITNQVS NFCGQINGVA GQNFSRLYLT KALHDN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.865 N/A N/A a.47.2 t-snare proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle