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View Structure Prediction Details

Protein: IAA19_ARATH
Organism: Arabidopsis thaliana
Length: 197 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IAA19_ARATH.

Description E-value Query
Range
Subject
Range
gi|21618019 - gi|21618019|gb|AAM67069.1| early auxin-induced protein IAA19 [Arabidopsis thaliana]
285.0 [0..1] [197..1]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKEGLGLEI TELRLGLPGR DVAEKMMKKR AFTEMNMTSS GSNSDQCESG VVSSGGDAEK  60
   61 VNDSPAAKSQ VVGWPPV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSYRKKNSCK EASTTKVGLG YVKVSMDGVP YLRKMDLGSS QGYDDLAFAL DKLFGFRGIG  60
   61 VALKDGDNCE YVTIYEDKDG DWMLAGDVPW GMFLESCKRL RIMKRSDATG FGLQPRGVDE 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.23
Match: 1wj6A
Description: Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle