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View Structure Prediction Details

Protein: IAA9_ARATH
Organism: Arabidopsis thaliana
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IAA9_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592701 - gi|21592701|gb|AAM64650.1| auxin-induced protein IAA9 [Arabidopsis thaliana]
407.0 [0..1] [338..1]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL SPLAEDDKAT  60
   61 ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL LPSKDEICSS SQKNNASGNK 120
  121 RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA TQSVTKKDVP QNIPKGQSST TNNSSSPPAA 180
  181 KAQIVGWPPV R

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.468521
Match: PF02309.7
Description: No description for PF02309.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [192-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYRKNTLATT CKNSDEVDGR PGSGALFVKV SMDGAPYLRK VDLRSYTNYG ELSSALEKMF  60
   61 TTFTLGQCGS NGAAGKDMLS ETKLKDLLNG KDYVLTYEDK DGDWMLVGDV PWEMFIDVCK 120
  121 KLKIMKGCDA IGLAAAPRAM EKSKMRA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.978
Match: 1ip9A
Description: Bud emergence mediator Bemp1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle