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View Structure Prediction Details

Protein: IAA4_ARATH
Organism: Arabidopsis thaliana
Length: 186 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IAA4_ARATH.

Description E-value Query
Range
Subject
Range
gi|99663 - gi|99663|pir||S12243 auxin-induced protein AUX2-11 - Arabidopsis thaliana
275.0 [0..1] [186..1]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVDVYDEL VNLKATELRL GLPGTEETVS CGKSNKRVLP EATEKEIEST GKTETASPPK  60
   61 AQIVGWP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.769551
Match: PF02309.7
Description: No description for PF02309.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVRSYRKNNV QTKKSESEGQ GNYVKVSMDG APYLRKIDLT MYKQYPELMK SLENMFKFSV  60
   61 GEYFEREGYK GSDFVPTYED KDGDWMLVGD VPWEMFVSSC KRLRIMKGSE VKGLGCGGL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.36
Match: 1ip9A
Description: Bud emergence mediator Bemp1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle