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View Structure Prediction Details

Protein: HY5_ARATH
Organism: Arabidopsis thaliana
Length: 168 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HY5_ARATH.

Description E-value Query
Range
Subject
Range
gi|114581857 - gi|114581857|ref|XP_001152057.1| PREDICTED: chimerin (chimaerin) 1 isoform 6 [Pan troglodytes]
103.0 [0..4] [152..267]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEQATSSLA ASSLPSSSER SSSSAPHLEI KEGIESDEEI RRVPEFGGEA VGKETSGRES  60
   61 GSATGQERTQ ATVGESQRKR GRTPAEKENK RLKRLLRNRV SAQQARERKK AYLSELENRV 120
  121 KDLENKNSEL EERLSTLQNE NQMLRHILKN TTGNKRGGGG GSNADASL

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Detection Method: PSI-BLAST
Confidence: 4.39794
Match: 1qvrA
Description: Crystal Structure Analysis of ClpB
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle