| Protein: | HMDH2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 562 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HMDH2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
840.0 | [0..3] | [559..2] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MEDLRRRFPT KKNGEEISNV AVDPPLRKAS DALPLPLYLT NTFFLSLFFA TVYFLLSRWR 60
61 EKIRNSTPLH VVDLSEICAL IGFVASFIYL LGF
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [94-562] |
1 11 21 31 41 51
| | | | | |
1 CGIDLIFRSS SDDDVWVNDG MIPCNQSLDC REVLPIKPNS VDPPRESELD SVEDEEIVKL 60
61 VIDGTIPSYS LETKLGDCKR AAAIRREAVQ RITGKSLTGL PLEGFDYNSI LGQCCEMPVG 120
121 YVQIPVGIAG PLLLDGVEYS VPMATTEGCL VASTNRGFKA IHLSGGAFSV LVKDAMTRAP 180
181 VVRFPSARRA ALVMFYLQDP SNFERLSLIF NKSSRFARLQ SITCTIAGRN LYPRFACSTG 240
241 DAMGMNMVSK GVQNVLDFVK SEFPDMDVIG ISGNYCSDKK ASAVNWIEGR GKHVVCEAFI 300
301 KAEIVEKVLK TSVEALVELN TLKNLVGSAM AGSLGGFNAH SSNIVSAVFI ATGQDPAQNV 360
361 ESSHCMTMIL PDGDDLHISV SMPCIEVGTV GGGTQLASQA ACLNLLGVKG SNNEKPGSNA 420
421 QQLARIVAGS VLAGELSLMS AIAAGQLVKS HMKYNRSSRD IGPSSQVNR
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1dq8A |
| Description: | NAD-binding domain of HMG-CoA reductase; Substrate-binding domain of HMG-CoA reductase |
Matching Structure (courtesy of the PDB): |
|
