| Protein: | HEM11_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 543 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HEM11_ARATH.
| Description | E-value | Query Range |
Subject Range |
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454.0 | [0..1] | [543..1] |
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428.0 | [0..1] | [541..1] |
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420.0 | [0..1] | [541..1] |
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413.0 | [0..1] | [543..1] |
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406.0 | [0..36] | [542..24] |
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Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MAVSSAFVGC PKLETLLNHH NLSPSSSSSS SVSQTPLGLN GVRVLPKNNR TRRGLIQKAR 60
61 CELSASSDSA SNAASISALE QLKNSAADRY TK
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.830 | d.20.1 | UBC-like |
| View | Download | 0.727 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.667 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.661 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.641 | d.20.1 | UBC-like |
| View | Download | 0.640 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.635 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.583 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.545 | d.93.1 | SH2 domain |
| View | Download | 0.528 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
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Region A: Residues: [93-543] |
1 11 21 31 41 51
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1 ERSSIVVIGL SIHTAPVEMR EKLAIPEAEW PRAIAELCGL NHIEEAAVLS TCNRMEIYVL 60
61 ALSQHRGVKE VTEWMSKTSG IPVSEICQHR FLLYNKDATQ HIFEVSAGLD SLVLGEGQIL 120
121 AQVKQVVKVG QGVNGFGRNI SGLFKHAITV GKRVRTETNI ASGAVSVSSA AVELALMKLP 180
181 QSSNVSARMC VIGAGKMGKL VIKHLMAKGC TKVVVVNRSE ERVSAIREEM PGIEIIYRPL 240
241 DEMLACASEA DVVFTSTASE TPLFLKEHVE NLPQASPEVG GLRHFVDISV PRNVGSCVGE 300
301 VETARVYNVD DLKEVVAANK EDRMRKAMEA QTIITEESTQ FEAWRDSLET VPTIKKLRAY 360
361 AERIRVAELE KCMSKMGDDI NKKTTRAVDD LSRGIVNRFL HGPMQHLRCD GSDSRTLSET 420
421 LENMHALNRM YGLEKDILEE KLKAMAEQQQ K
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| Detection Method: | |
| Confidence: | 59.0 |
| Match: | 1gpjA |
| Description: | Glutamyl tRNA-reductase dimerization domain; Glutamyl tRNA-reductase middle domain; Glutamyl tRNA-reductase catalytic, N-terminal domain |
Matching Structure (courtesy of the PDB): |
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