| Protein: | KNAT1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 398 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KNAT1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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220.0 | [0..1] | [398..1] |
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213.0 | [0..7] | [392..35] |
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212.0 | [0..7] | [392..43] |
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207.0 | [0..1] | [398..1] |
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204.0 | [0..8] | [392..36] |
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197.0 | [0..1] | [398..1] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MEEYQHDNST TPQRVSFLYS PISSSNKNDN TSDTNNNNNN NNSSNYGPGY NNTNNNNHHH 60
61 QHMLFPHMSS LLPQTTENCF RSDHDQPNNN NNPSVKSE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [99-187] |
1 11 21 31 41 51
| | | | | |
1 ASSSRINHYS MLMRAIHNTQ EANNNNNDNV SDVEAMKAKI IAHPHYSTLL QAYLDCQKIG 60
61 APPDVVDRIT AARQDFEARQ QRSTPSVSA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.865 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.724 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.656 | N/A | N/A | a.7.17 | Description not found. |
| View | Download | 0.647 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.638 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.635 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.602 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.602 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.526 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.523 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.523 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.262 | N/A | N/A | a.23.2 | Diol dehydratase, gamma subunit |
| View | Download | 0.250 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.248 | N/A | N/A | a.7.8 | GAT domain |
|
Region A: Residues: [188-244] |
1 11 21 31 41 51
| | | | | |
1 SSRDPELDQF MEAYCDMLVK YREELTRPIQ EAMEFIRRIE SQLSMLCQSP IHILNNP
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| Detection Method: | |
| Confidence: | 28.744727 |
| Match: | PF03791.4 |
| Description: | No description for PF03791.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.718 | N/A | N/A | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.700 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.579 | N/A | N/A | d.48.1 | RecA protein, C-terminal domain |
| View | Download | 0.560 | N/A | N/A | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.548 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.546 | N/A | N/A | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.546 | N/A | N/A | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.536 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.536 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.382 | N/A | N/A | a.159.4 | Description not found. |
| View | Download | 0.298 | N/A | N/A | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.278 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.267 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.266 | N/A | N/A | a.126.1 | Serum albumin-like |
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Region A: Residues: [245-398] |
1 11 21 31 41 51
| | | | | |
1 DGKSDNMGSS DEEQENNSGG ETELPEIDPR AEDRELKNHL LKKYSGYLSS LKQELSKKKK 60
61 KGKLPKEARQ KLLTWWELHY KWPYPSESEK VALAESTGLD QKQINNWFIN QRKRHWKPSE 120
121 DMQFMVMDGL QHPHHAALYM DGHYMGDGPY RLGP
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| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 1b72A |
| Description: | Homeobox protein hox-b1 |
Matching Structure (courtesy of the PDB): |
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