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View Structure Prediction Details

Protein: HIPL1_ARATH
Organism: Arabidopsis thaliana
Length: 695 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIPL1_ARATH.

Description E-value Query
Range
Subject
Range
gi|77556819, gi|... - gi|77556819|gb|ABA99615.1| HIPL1 protein precursor, putative, expressed [Oryza sativa (japonica cult...
506.0 [0..8] [686..7]

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Predicted Domain #1
Region A:
Residues: [1-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLHQFLVFL FLFLSCFALS SWALPLCSDS RAPSEVNSTL SFCPYKGKTC CNTMKDTSLM  60
   61 KQFQAMNISD KGCASVVKSI LCANCDPFSS DLFRDNSDQQ SVPILCNSTS SANSTENFCS 120
  121 ETWETCQNVS ISGSLFAASL QGRAGAPSNK NASKLADLWQ SKTDFCSAFG GASSNET

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [178-695]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VCFSGEPVAL NDNDTTPDKP PSGICLEKIG NGSYLNMVPH PDGSNRAFFS TQPGIVFLAG  60
   61 IPDQDSGGVL DVDPSSPFVD MTDEIHFDTE FGMMGMAFHP KFAQNGRFFA SFNCDKSKWP 120
  121 GCTGRCSCNS DVNCDPSKLT PDSGSQPCQY QTVIAEYTAN STSSDPSKAK NAKPTEVRRI 180
  181 FTMGLPFTSH HAGQILFGPD GYLYFMMGDG GGGADPYNFA QNKKSLLGKI MRLDVDNIPS 240
  241 ASEISKMGLW GNYSIPKDNP FREDKELEPE IWAVGLRNPW RCSFDSSRPS YFMCADVGQD 300
  301 TYEEVDLISK GGNYGWRVYE GPDLFHPESS PGGNTSVKSL NPIFPVMGYN HSEVDSSGKS 360
  361 ASITGGYFYR SETDPCIAGR YVYADLYGNG VWAGIETPAN SGSFVTKRTT FSCASDSPMK 420
  421 CSDSPGTSGL SLGYVFSFGE DNNKDIYLLT SNGVYRVVRP SRCNLTCSKE NSTARRNPGT 480
  481 SSSPSSSSSS CYKHINGFHG SLVVLFVSLS LILLGLLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.39794
Match: 2g8sA
Description: No description for 2g8sA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle