| Protein: | HFR1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 292 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HFR1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
121.0 | [0..1] | [168..1] |
|
|
114.0 | [0..2] | [229..185] |
|
|
108.0 | [0..37] | [254..307] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MSNNQAFMEL GWRNDVGSLA VKDQGMMSER ARSDEDRLIN GLKWGYGYFD HDQTDNYLQI 60
61 VPEIHKEVEN AKEDLLVVVP DEHSETDDHH HIKDFSERSD HRFYLRNKHE NPKKRRIQVL 120
121 SSDDESE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [128-209] |
1 11 21 31 41 51
| | | | | |
1 EFTREVPSVT RKGSKRRRRD EKMSNKMRKL QQLVPNCHKT DKVSVLDKTI EYMKNLQLQL 60
61 QMMSTVGVNP YFLPATLGFG MH
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [210-292] |
1 11 21 31 41 51
| | | | | |
1 NHMLTAMASA HGLNPANHMM PSPLIPALNW PLPPFTNISF PHSSSQSLFL TTSSPASSPQ 60
61 SLHGLVPYFP SFLDFSSHAM RRL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.535 | a.77.1 | DEATH domain |
| View | Download | 0.486 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.486 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.399 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.399 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.399 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.399 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.355 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.313 | a.77.1 | DEATH domain |
