| Protein: | HAT3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 315 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAT3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
150.0 | [0..1] | [315..1] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MSERDDGLGL SLSLSLGFNQ KDPSSRLNPM PLASYASSSH MQHMQQSNYN HPQKIQNTWI 60
61 NMFQSSERNS DMRSFLRGID V
|
| Detection Method: |  |
| Confidence: | 37.552842 |
| Match: | PF04618.3 |
| Description: | No description for PF04618.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [82-230] |
1 11 21 31 41 51
| | | | | |
1 NRAPSTVVVD VEDEGAGVSS PNSTVSSVMS GKKSERELMA AAGAVGGGRV EDNEIERASC 60
61 SLGGGSDDED GSGNGDDSSR KKLRLSKEQA LVLEETFKEH STLNPKQKMA LAKQLNLRTR 120
121 QVEVWFQNRR ARTKLKQTEV DCEYLKRCC
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1gt0C |
| Description: | Oct-1 POU Homeodomain; Oct-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.971797124886045 | bayes_pls_golite062009 |
| nucleic acid binding | 0.74904610690468 | bayes_pls_golite062009 |
| DNA binding | 0.73457854282882 | bayes_pls_golite062009 |
|
Region A: Residues: [231-315] |
1 11 21 31 41 51
| | | | | |
1 ENLTDENRRL QKEVSELRAL KLSPHLYMHM KPPTTLTMCP SCERVAVTSS SSSVAPPVMN 60
61 SSSPMGPMSP WAAMPLRQRP AAGSH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
