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View Structure Prediction Details

Protein: GUN4C_ARATH
Organism: Arabidopsis thaliana
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUN4C_ARATH.

Description E-value Query
Range
Subject
Range
gi|32816239 - gi|32816239|gb|AAP88435.1| GUN4 mutant [Arabidopsis thaliana]
325.0 [0..1] [265..1]

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Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTNSLHHH HHSSPSYTHH RNNLHCQSHF GPTSLSLKQP TSAATFSLIC SASSTSSSTT  60
   61 AVSAVSTTNA SATTAETATI FDVLENHLVN QNFRQADEET RRLLIQISGE AAVKRGYVFF 120
  121 SEVKTISPED LQAIDNLWIK HSDGRFGYSV QRKIWLKVKK DFTRFFVKVE WMKLLDTEVV 180
  181 QYNYRAFPDE FKWELNDETP LGHLPLTNAL RGTQLLKCVL SHPAFATADD NSGETEDELN 240
  241 RGVAVAKEQA GVGADKRVFK TNYSF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.154902
Match: 1z3xA
Description: Structure of Gun4 from Thermosynechococcus elongatus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle