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View Structure Prediction Details

Protein: GLR22_ARATH
Organism: Arabidopsis thaliana
Length: 920 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for GLR22_ARATH.

Predicted Domain #1
Region A:
Residues: [1-516]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSKLFFRF LFLFFFFCLE SSRGQDNGKT QVNIGVVSDV GTSYPDVAML CINMSLADFY  60
   61 SSRPQFQTRL VVNVGDSKND VVGAATAAID LIKNKQVKAI LGPWTSMQAH FLIEIGQKSR 120
  121 VPVVSYSATS PSLTSLRSPY FFRATYEDSS QVHAIKAIIK LFGWREVVPV YIDNTFGEGI 180
  181 MPRLTDSLQD INVRIPYRSV IPLNATDQDI SVELLKMMNM PTRVFIVHMS SSLASTVFIK 240
  241 AKELGLMKPG YVWILTNGVM DGLRSINETG IEAMEGVLGI KTYIPKSKDL ETFRSRWKRR 300
  301 FPQMELNVYG LWAYDATTAL AMAIEDAGIN NMTFSNVDTG KNVSELDGLG LSQFGPKLLQ 360
  361 TVSTVQFKGL AGDFHFVSGQ LQPSVFEIVN MIGTGERSIG FWTEGNGLVK KLDQEPRSIG 420
  421 TLSTWPDHLK HIIWPGEAVS VPKGWEIPTN GKKLRIGVPK RIGFTDLVKV TRDPITNSTV 480
  481 VKGFCIDFFE AVIQAMPYDV SYEFFPFEKP NGEPAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.30103
Match: 2e4uA
Description: No description for 2e4uA was found.

Predicted Domain #2
Region A:
Residues: [517-614]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHNDLVHQVY LGQFDAVVGD TTILANRSSF VDFTLPFMKS GVGLIVPLKD EVKRDKFSFL  60
   61 KPLSIELWLT TLVFFFLVGI SVWTLEHRVN SDFRGPAN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.522879
Match: 2a5sA
Description: Crystal Structure Of The NR2A Ligand Binding Core In Complex With Glutamate
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [615-809]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YQASTIFWFA FSTMVFAPRE RVLSFGARSL VVTWYFVLLV LTQSYTASLA SLLTSQQLNP  60
   61 TITSMSSLLH RGETVGYQRT SFILGKLNET GFPQSSLVPF DTAEECDELL KKGPKNGGVA 120
  121 AAFLGTPYVR LFLGQYCNTY KMVEEPFNVD GFGFVFPIGS PLVADVSRAI LKVAESPKAV 180
  181 ELEHAWFKKK EQSCP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.221849
Match: 2uxaA
Description: No description for 2uxaA was found.

Predicted Domain #4
Region A:
Residues: [810-920]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPVTNPDSNP TVTAIQLGVG SFWFLFLVVF VVCVLALGKF TFCFLWKTKG KDLWKEFLKR  60
   61 DTDSYINDIE KCLCSQEMPE NSNKATNQTN YGMELRVRNI VQVNQTDPDC L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle