YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GL114_ARATH
Organism: Arabidopsis thaliana
Length: 222 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GL114_ARATH.

Description E-value Query
Range
Subject
Range
GL113_ARATH, GL1... - (P92997) Germin-like protein subfamily 1 member 13 precursor, Germin-like protein subfamily 1 member...
237.0 [0..1] [222..1]

Back

Predicted Domain #1
Region A:
Residues: [1-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSKSLILI TLSALVISFA EANDPSPLQD FCVAIGDLKN GVFVNGKFCK DPKQAKAEDF  60
   61 FYSGLNQAGT TNNKVKSNVT TVNVDQIPGL NTLGISLVRI DYAPYGQNPP HTHPRATEIL 120
  121 VLVEGTLYVG FVSSNQDNNR LFAKVLNPGD VFVFPIGMIH FQVNIGKTPA VAFAGLSSQN 180
  181 AGVITIADTV FGSTPPINPD ILAQAFQLDV NVVKDLEAKF KN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.69897
Match: 2et7A
Description: Structural and spectroscopic insights into the mechanism of oxalate oxidase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle