YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GCST_ARATH
Organism: Arabidopsis thaliana
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCST_ARATH.

Description E-value Query
Range
Subject
Range
GCST_SOLTU - Aminomethyltransferase, mitochondrial OS=Solanum tuberosum GN=GDCST PE=2 SV=1
475.0 [0..1] [407..1]

Back

Predicted Domain #1
Region A:
Residues: [1-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGGSLWQLG QSITRRLAQS DKKVVSRRYF ASEADLKKTA LYDFHVAHGG KMVPFAGWSM  60
   61 PIQYKDSIMD STVNCRENGS LFDVAHMCGL SLKGKDCVPF LETLVVADVA GLAPGTGSLT 120
  121 VFTNEKGGAI DDSVITKVTD EHIYLVVNAG CRDKDLAHIE EHMKAFKSKG GDVSWHIHDE 180
  181 RSLLALQGPL AAPVLQHLTK EDLSKLYFGN FQILDINGST CFLTRTGYTG EDGFEISVPD 240
  241 EHAVDLAKAI LEKSEGKVRL TGLGARDSLR LEAGLCLYGN DMEQHISPVE AGLTWAIGKR 300
  301 RRAEGGFLGA DVILQQLKDG PTIRRVGFFS SGPPARSHSE VHDESGNKIG EITSGGFSPN 360
  361 LKKNIAMGYV KSGQHKTGTK VKILVRGKPY EGSITKMPFV ATKYYKPT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 118.0
Match: 1wsrA
Description: Crystal Structure of Human T-protein of Glycine Cleavage System
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle