| Protein: | RIBA1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 543 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIBA1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
615.0 | [0..1] | [527..1] |
|
|
614.0 | [0..1] | [541..1] |
|
|
613.0 | [0..1] | [542..1] |
|
|
602.0 | [0..128] | [525..9] |
|
|
589.0 | [0..128] | [535..1] |
|
|
580.0 | [0..128] | [527..7] |
|
|
580.0 | [0..128] | [526..8] |
|
|
580.0 | [0..127] | [526..2] |
|
|
580.0 | [0..128] | [525..4] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MSSINLSSSS PSTISLSRSR LSQSSTTLLH GLHRVTLPSN HPLSTFSIKT NTGKVKAAVI 60
61 SREDDLLSFT NGNTPLSNGS LIDDRTEEPL EADSVSLGTL AADSAPAPAN GFVAEDDDFE 120
121 LDLPTP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [127-341] |
1 11 21 31 41 51
| | | | | |
1 GFSSIPEAIE DIRQGKLVVV VDDEDRENEG DLVMAAQLAT PEAMAFIVRH GTGIVCVSMK 60
61 EDDLERLHLP LMVNQKENEE KLSTAFTVTV DAKHGTTTGV SARDRATTIL SLASRDSKPE 120
121 DFNRPGHIFP LKYREGGVLK RAGHTEASVD LTVLAGLDPV GVLCEIVDDD GSMARLPKLR 180
181 EFAAENNLKV VSIADLIRYR RKRDKLVERA SAARI
|
| Detection Method: | |
| Confidence: | 76.522879 |
| Match: | 1iezA |
| Description: | 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [342-543] |
1 11 21 31 41 51
| | | | | |
1 PTMWGPFTAY CYRSILDGIE HIAMVKGEIG DGQDILVRVH SECLTGDIFG SARCDCGNQL 60
61 ALSMQQIEAT GRGVLVYLRG HEGRGIGLGH KLRAYNLQDA GRDTVEANEE LGLPVDSREY 120
121 GIGAQIIRDL GVRTMKLMTN NPAKYVGLKG YGLAIVGRVP LLSLITKENK RYLETKRTKM 180
181 GHMYGLKFKG DVVEKIESES ES
|
| Detection Method: | |
| Confidence: | 72.69897 |
| Match: | 2bz0A |
| Description: | Crystal Structure of E. coli GTP cyclohydrolase II in complex with GTP analogue, GMPcPP, and Zinc |
Matching Structure (courtesy of the PDB): |
|
