YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GALK1_ARATH
Organism: Arabidopsis thaliana
Length: 496 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GALK1_ARATH.

Description E-value Query
Range
Subject
Range
gi|2736186, gi|1... - gi|2736186|gb|AAB94084.1| galactose kinase [Arabidopsis thaliana], pir||T51592 galactokinase (EC 2.7...
409.0 [0..1] [496..1]

Back

Predicted Domain #1
Region A:
Residues: [1-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKPEEVSVP IFTSLEPVYG EGSLLQEATQ RFDVLKANFN DVFGASPQLF ARSPGRVNLI  60
   61 GEHIDYEGYS VLPMAIRQDT IIAIRKCEDQ KQLRIANVND KYTMCTYPAD PDQEIDLKNH 120
  121 KWGHYFICAY KGFHEYAKSK GVNLGSPVGL DVLVDGIVPT GSGLSSSAAF VCSATIAIMA 180
  181 VFGHNFEKKE LAQLTCECER HIGTQSGGMD QAISIMAKTG FAELIDFNPV RATDVKLPDG 240
  241 GSFVIAHSLA ESQKAVTAAK NYNNRVVECR LASIILGVKL GMEPKEAISK VKTLSDVEGL 300
  301 CVSFAGDRGS SDPLLAVKEY LKEEPYTAEE IEKILEEKLP SIVNNDPTSL AVLNAATHFK 360
  361 LHQRAAHVYS EARRVHGFKD TVNSNLSDEE KLKKLGDLMN ESHYSCSVLY ECSCPELEEL 420
  421 VQVCKENGAL GARLTGAGWG GCAVALVKEF DVTQFIPAVK EKYYKKRVEK GVVKKEDMEL 480
  481 YLFASKPSSG AAIFNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.154902
Match: 2a2cA
Description: x-ray structure of human N-acetyl galactosamine kinase complexed with Mg-ADP and N-acetyl galactosamine 1-phosphate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle