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View Structure Prediction Details

Protein: FUT4_ARATH
Organism: Arabidopsis thaliana
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FUT4_ARATH.

Description E-value Query
Range
Subject
Range
gi|42570789 - gi|42570789|ref|NP_973468.1| FUT4; fucosyltransferase [Arabidopsis thaliana]
932.0 [0..15] [503..12]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCHSLLAQR ILLLTFFFVI CSDESETPGR DRLIGGLLTA DFDEGSCLSR YHKTFLYRKP  60
   61 SPYKPSEYLV SKLRSYEMLH KRCGPGTKAY KEATKHLSHD ENYNASKSDG ECRYVVWLAD 120
  121 Y

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLGNRLLTLA SVFLYALLTD RIILVDNRKD IGDLLCEPFP GTSWLLPLDF PLMKYADGYH  60
   61 KGYSRCYGTM LENHSINSTS FPPHLYMHNL HDSRDSDKMF FCQKDQSLID KVPWLIFRAN 120
  121 VYFVPSLWFN PTFQTELTKL FPQKETVFHH LGRYLFHPKN QVWDIVTKYY HDHLSKADER 180
  181 LGIQIRVFRD QGGYYQHVMD QVISCTQREK LLPELATQEE SKVNISNIPK SKAVLVTSLS 240
  241 PEYSKKLENM FSERANMTGE IIKVYQPSGE RYQQTDKKVH DQKALAEMYL LSLTDNIVAS 300
  301 SRSTFGYVAY SLGGLKPWLL YLPNDNKAPD PPCVRSTSME PCFLTPPTHG CEPDAWGTES 360
  361 GKVVPFVRYC EDIWGLKLFD EL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.27
Match: 2hhcA
Description: No description for 2hhcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle