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View Structure Prediction Details

Protein: FT_ARATH
Organism: Arabidopsis thaliana
Length: 175 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FT_ARATH.

Description E-value Query
Range
Subject
Range
gi|222851084, gi... - gi|224098778|ref|XP_002311264.1| predicted protein [Populus trichocarpa], gi|222851084|gb|EEE88631.1...
gi|38304185 - gi|38304185|dbj|BAD01576.1| flowering locus T [Populus nigra]
240.0 [0..3] [174..2]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED  60
   61 LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT FGNEIVCYEN PSPTAGIHRV 120
  121 VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.30103
Match: 1wkpA
Description: flowering locus t (ft) from arabidopsis thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle