YRC Public Data Repository - Protein Structure Prediction

Protein:	FK151_ARATH
Organism:	Arabidopsis thaliana
Length:	153 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FK151_ARATH.

Description	E-value	Query Range	Subject Range
gi\|118649112, gi... - gi\|118713573\|ref\|ZP_01566138.1\| Peptidylprolyl isomerase [Burkholderia cenocepacia MC0-3], gi\|118649... gi\|67656803, gi\|... - gi\|67656803\|ref\|ZP_00454184.1\| Peptidylprolyl isomerase [Burkholderia cenocepacia AU 1054], gi\|67095... gi\|67667692, gi\|... - gi\|67667692\|ref\|ZP_00464906.1\| Peptidylprolyl isomerase [Burkholderia cenocepacia HI2424], gi\|670987...	156.0	[0..31]	[139..109]

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Predicted Domain #1

Region A:
Residues: [1-153]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR  60
   61 GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC VGEKRKLKIP SKLGYGDNGS 120
  121 PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.39794
Match:	2pbcA
Description:	No description for 2pbcA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits