| Protein: | FDFT_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 410 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FDFT_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
401.0 | [0..1] | [410..1] |
|
Region A: Residues: [1-410] |
1 11 21 31 41 51
| | | | | |
1 MGSLGTMLRY PDDIYPLLKM KRAIEKAEKQ IPPEPHWGFC YSMLHKVSRS FSLVIQQLNT 60
61 ELRNAVCVFY LVLRALDTVE DDTSIPTDEK VPILIAFHRH IYDTDWHYSC GTKEYKILMD 120
121 QFHHVSAAFL ELEKGYQEAI EEITRRMGAG MAKFICQEVE TVDDYDEYCH YVAGLVGLGL 180
181 SKLFLAAGSE VLTPDWEAIS NSMGLFLQKT NIIRDYLEDI NEIPKSRMFW PREIWGKYAD 240
241 KLEDLKYEEN TNKSVQCLNE MVTNALMHIE DCLKYMVSLR DPSIFRFCAI PQIMAIGTLA 300
301 LCYNNEQVFR GVVKLRRGLT AKVIDRTKTM ADVYGAFYDF SCMLKTKVDK NDPNASKTLN 360
361 RLEAVQKLCR DAGVLQNRKS YVNDKGQPNS VFIIMVVILL AIVFAYLRAN
|
| Detection Method: |  |
| Confidence: | 82.30103 |
| Match: | 1ezfA |
| Description: | Squalene synthase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| prenyltransferase activity | 5.34003736022396 | bayes_pls_golite062009 |
| farnesyl-diphosphate farnesyltransferase activity | 5.04441642023356 | bayes_pls_golite062009 |
| geranyltranstransferase activity | 3.86169009960142 | bayes_pls_golite062009 |
| farnesyltranstransferase activity | 3.11591733497708 | bayes_pls_golite062009 |
| catalytic activity | 2.4040324437254 | bayes_pls_golite062009 |
| dimethylallyltranstransferase activity | 1.91559289231283 | bayes_pls_golite062009 |
| transferase activity, transferring alkyl or aryl (other than methyl) groups | 1.82540911622956 | bayes_pls_golite062009 |
| transferase activity | 1.77738506203957 | bayes_pls_golite062009 |
| binding | 0.0206192709356209 | bayes_pls_golite062009 |
