| Protein: | EMS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1192 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for EMS1_ARATH.
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Region A: Residues: [1-722] |
1 11 21 31 41 51
| | | | | |
1 MAFLTALFLF LFFSFSSSAI VDLSSETTSL ISFKRSLENP SLLSSWNVSS SASHCDWVGV 60
61 TCLLGRVNSL SLPSLSLRGQ IPKEISSLKN LRELCLAGNQ FSGKIPPEIW NLKHLQTLDL 120
121 SGNSLTGLLP RLLSELPQLL YLDLSDNHFS GSLPPSFFIS LPALSSLDVS NNSLSGEIPP 180
181 EIGKLSNLSN LYMGLNSFSG QIPSEIGNIS LLKNFAAPSC FFNGPLPKEI SKLKHLAKLD 240
241 LSYNPLKCSI PKSFGELHNL SILNLVSAEL IGLIPPELGN CKSLKSLMLS FNSLSGPLPL 300
301 ELSEIPLLTF SAERNQLSGS LPSWMGKWKV LDSLLLANNR FSGEIPHEIE DCPMLKHLSL 360
361 ASNLLSGSIP RELCGSGSLE AIDLSGNLLS GTIEEVFDGC SSLGELLLTN NQINGSIPED 420
421 LWKLPLMALD LDSNNFTGEI PKSLWKSTNL MEFTASYNRL EGYLPAEIGN AASLKRLVLS 480
481 DNQLTGEIPR EIGKLTSLSV LNLNANMFQG KIPVELGDCT SLTTLDLGSN NLQGQIPDKI 540
541 TALAQLQCLV LSYNNLSGSI PSKPSAYFHQ IEMPDLSFLQ HHGIFDLSYN RLSGPIPEEL 600
601 GECLVLVEIS LSNNHLSGEI PASLSRLTNL TILDLSGNAL TGSIPKEMGN SLKLQGLNLA 660
661 NNQLNGHIPE SFGLLGSLVK LNLTKNKLDG PVPASLGNLK ELTHMDLSFN NLSGELSSEL 720
721 ST
|
| Detection Method: |  |
| Confidence: | 70.522879 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [723-887] |
1 11 21 31 41 51
| | | | | |
1 MEKLVGLYIE QNKFTGEIPS ELGNLTQLEY LDVSENLLSG EIPTKICGLP NLEFLNLAKN 60
61 NLRGEVPSDG VCQDPSKALL SGNKELCGRV VGSDCKIEGT KLRSAWGIAG LMLGFTIIVF 120
121 VFVFSLRRWA MTKRVKQRDD PERMEESRLK GFVDQNLYFL SGSRS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [888-1192] |
1 11 21 31 41 51
| | | | | |
1 REPLSINIAM FEQPLLKVRL GDIVEATDHF SKKNIIGDGG FGTVYKACLP GEKTVAVKKL 60
61 SEAKTQGNRE FMAEMETLGK VKHPNLVSLL GYCSFSEEKL LVYEYMVNGS LDHWLRNQTG 120
121 MLEVLDWSKR LKIAVGAARG LAFLHHGFIP HIIHRDIKAS NILLDGDFEP KVADFGLARL 180
181 ISACESHVST VIAGTFGYIP PEYGQSARAT TKGDVYSFGV ILLELVTGKE PTGPDFKESE 240
241 GGNLVGWAIQ KINQGKAVDV IDPLLVSVAL KNSQLRLLQI AMLCLAETPA KRPNMLDVLK 300
301 ALKEI
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| Detection Method: | |
| Confidence: | 60.09691 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
