YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: EXPA7_ARATH
Organism: Arabidopsis thaliana
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXPA7_ARATH.

Description E-value Query
Range
Subject
Range
gi|11932092 - gi|11932092|emb|CAC19184.1| alpha-expansin [Cicer arietinum]
363.0 [0..11] [261..12]

Back

Predicted Domain #1
Region A:
Residues: [1-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY  60
   61 GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC YSGKSTVVTA TNLCPPNWYQ 120
  121 DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL 180
  181 IFVMNVGGAG DIKSMAVKGS RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY 240
  241 AWNVAPANWS GGKTYKSTAN FR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.69897
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle