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View Structure Prediction Details

Protein: EXPA4_ARATH
Organism: Arabidopsis thaliana
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXPA4_ARATH.

Description E-value Query
Range
Subject
Range
gi|51507371 - gi|51507371|emb|CAH18933.1| expansin [Pyrus communis]
388.0 [0..1] [257..1]

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Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKLAILFT TFVLFSLADA RIPGIYSGGA WQNAHATFYG GSDASGTMGG ACGYGNLYSQ  60
   61 GYGTNTAALS TALFNNGMSC GACFELKCAN DPQWCHSGSP SILITATNFC PPNLAQPSDN 120
  121 GGWCNPPREH FDLAMPVFLK IAQYRAGIVP VSYRRVPCRK RGGIRFTING HRYFNLVLIT 180
  181 NVAGAGDIVR ASVKGSRTGW MSLSRNWGQN WQSNAVLVGQ ALSFRVTGSD RRTSTSWNMV 240
  241 PSNWQFGQTF VGKNFRV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.30103
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle