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View Structure Prediction Details

Protein: EXPA3_ARATH
Organism: Arabidopsis thaliana
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXPA3_ARATH.

Description E-value Query
Range
Subject
Range
gi|20502784 - gi|20502784|gb|AAM22625.1|AF428178_1 expansin 11 precursor [Rumex palustris]
380.0 [0..4] [262..1]

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Predicted Domain #1
Region A:
Residues: [1-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTATAFRVGL WLAVTASFLL TATNAKIPGV YSGGPWQNAH ATFYGGSDAS GTMGGACGYG  60
   61 NLYSQGYGVN TAALSTALFN NGFSCGACFE IKCTDDPRWC VPGNPSILVT ATNFCPPNFA 120
  121 QPSDDGGWCN PPREHFDLAM PMFLKIGLYR AGIVPVSYRR VPCRKIGGIR FTVNGFRYFN 180
  181 LVLVTNVAGA GDINGVSVKG SKTDWVRMSR NWGQNWQSNA VLIGQSLSFR VTASDRRSST 240
  241 SWNVAPATWQ FGQTFSGKNF RV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.522879
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle