YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: EXLA1_ARATH
Organism: Arabidopsis thaliana
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXLA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21615409 - gi|21615409|emb|CAD33924.1| alpha-expansin 4 [Cicer arietinum]
322.0 [0..1] [248..1]

Back

Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA  60
   61 AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK SNQTDLVLSS RAFRAMAKPI 120
  121 VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID 180
  181 IAQVGSSPNW GYMTRSHGAV WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK 240
  241 IYDAGVQITD IAQEGCDPCD AHIWN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.522879
Match: 2hczX
Description: No description for 2hczX was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle