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View Structure Prediction Details

Protein: EXP20_ARATH
Organism: Arabidopsis thaliana
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXP20_ARATH.

Description E-value Query
Range
Subject
Range
gi|68532885 - gi|68532885|dbj|BAE06067.1| expansin [Sagittaria pygmaea]
364.0 [0..12] [254..24]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSGLQQLAL CLFFILCRLF QATAEDDWKI ATATLSRDRD GSSSVATGGA CGYGDLRQSS  60
   61 FAGYSAGLSG KLFNRGSSCG ACLEVRCVNH IRWCLQGSPS VVVTATDFCP PNSGLSSDYG 120
  121 GWCNFPKEHL ELSHAAFTGI AETRAEMIPI QYRRVKCGRR GGLRFSLSGS SHFFQVLISN 180
  181 VGLDGEVVGV KVKGHTTAWI PMARNWGQNW HSSLDLIGQS LSFEVTLKGG KTIASYDVAP 240
  241 PYWRFGMTYQ GKQFHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.69897
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle