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View Structure Prediction Details

Protein: EXP18_ARATH
Organism: Arabidopsis thaliana
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXP18_ARATH.

Description E-value Query
Range
Subject
Range
gi|5714392 - gi|5714392|gb|AAD47901.1|AF085330_1 expansin [Pinus taeda]
361.0 [0..1] [253..1]

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Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQNLYRKCL VILSMMAMIG TSMATYAGTP WRTASATFYG DDTGSATMGG ACGYGNMYDS  60
   61 GYGVATTALS TALFNEGYAC GQCFQLKCVS SPNCYYGSPA TVVTATNICP PNYGQASNNG 120
  121 GWCNPPRVHF DLTKPAFMKI ANWKAGIIPV SYRRVACKKI GGIRFKFEGN GYWLLVYVMN 180
  181 VGGPGDIKTM AVKGSRTGWI NMSHNWGASY QAFSSLYGQS LSFRLTSYTT RQTIYAYNAA 240
  241 PASWSAGKTY QSKANFN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.154902
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle