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View Structure Prediction Details

Protein: EXP17_ARATH
Organism: Arabidopsis thaliana
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXP17_ARATH.

Description E-value Query
Range
Subject
Range
gi|5714392 - gi|5714392|gb|AAD47901.1|AF085330_1 expansin [Pinus taeda]
362.0 [0..1] [252..4]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKIFSLLVA MIFSTMFFMK ISSVSAGWLQ AHATFYGGSD ASGTMGGACG YGNLYTDGYK  60
   61 TNTAALSTAL FNDGKSCGGC YQILCDATKV PQWCLKGKSI TITATNFCPP NFAQASDNGG 120
  121 WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKKVGCRRSG GMRFTINGRN YFELVLISNV 180
  181 AGGGEISKVW IKGSKSNKWE TMSRNWGANY QSNTYLNGQS LSFKVQLSDG SIKAALNVVP 240
  241 SNWRFGQSFK SNVNF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.522879
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle