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View Structure Prediction Details

Protein: EXP16_ARATH
Organism: Arabidopsis thaliana
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXP16_ARATH.

Description E-value Query
Range
Subject
Range
gi|51507371 - gi|51507371|emb|CAH18933.1| expansin [Pyrus communis]
391.0 [0..3] [260..1]

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Predicted Domain #1
Region A:
Residues: [1-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAINPLILLT IFPLFLLLSF TDAGIPRVFS GGSWQTAHAT FYGGNDASGT MGGACGYGNL  60
   61 YSQGYGTNTA ALSTSLFNSG QSCGACFEIK CVNDPKWCHP GNPSVFVTAT NFCPPNLAQP 120
  121 SDNGGWCNPP RSHFDLAMPV FLKIAEYRAG IVPISYRRVA CRKSGGIRFT INGHRYFNLV 180
  181 LITNVAGAGD IARTSVKGSK TGWMSLTRNW GQNWQSNAVL VGQSLSFRVT SSDRRTSTSW 240
  241 NIAPSNWQFG QTFVGKNFRV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.30103
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle