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View Structure Prediction Details

Protein: EXP10_ARATH
Organism: Arabidopsis thaliana
Length: 249 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXP10_ARATH.

Description E-value Query
Range
Subject
Range
gi|21615409 - gi|21615409|emb|CAD33924.1| alpha-expansin 4 [Cicer arietinum]
382.0 [0..1] [249..1]

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Predicted Domain #1
Region A:
Residues: [1-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHLGFLVMI MVGVMASSVS GYGGGWINAH ATFYGGGDAS GTMGGACGYG NLYSQGYGTS  60
   61 TAALSTALFN NGLSCGSCFE IRCENDGKWC LPGSIVVTAT NFCPPNNALA NNNGGWCNPP 120
  121 LEHFDLAQPV FQRIAQYRAG IVPVSYRRVP CRRRGGIRFT INGHSYFNLV LITNVGGAGD 180
  181 VHSAAIKGSR TVWQAMSRNW GQNWQSNSYL NGQALSFKVT TSDGRTVVSF NAAPAGWSYG 240
  241 QTFAGGQFR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.522879
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle