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View Structure Prediction Details

Protein: AHL27_ARATH
Organism: Arabidopsis thaliana
Length: 311 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AHL27_ARATH.

Description E-value Query
Range
Subject
Range
gi|89257682 - gi|89257682|gb|ABD65169.1| hypothetical protein 40.t00056 [Brassica oleracea]
207.0 [0..3] [287..2]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGYEQGGG ASRYFHNLFR PEIHHQQLQP QGGINLIDQH HHQHQQHQQQ QQPSDDSRES  60
   61 DHSNKDHHQQ GRPDSDPNTS SSAPGKRPRG RPPGSKNKAK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.95
Match: 1dveA
Description: Heme oxygenase-1 (HO-1)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [101-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT  60
   61 PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG LSIFLAGGQG QVVGGSVVAP 120
  121 LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ 180
  181 GQLGGNVGGY GFSGDPHLLG WGAGTPSRPP F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.522879
Match: 2h6lA
Description: No description for 2h6lA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.210430303475354 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle