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View Structure Prediction Details

Protein: EIN3_ARATH
Organism: Arabidopsis thaliana
Length: 628 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EIN3_ARATH.

Description E-value Query
Range
Subject
Range
gi|30016896 - gi|30016896|gb|AAP03998.1| EIL2 [Nicotiana tabacum]
958.0 [0..1] [628..2]
gi|92897732, gi|... - gi|92897732|gb|ABE93847.1| Ethylene insensitive 3 [Medicago truncatula], gi|92874341|gb|ABE82621.1| ...
926.0 [0..1] [627..2]
gi|18643341 - gi|18643341|gb|AAL76272.1|AF467784_1 transcription factor EIL1 [Vigna radiata]
922.0 [0..1] [628..2]
gi|14280042 - gi|14280042|gb|AAK58858.1|AF328785_1 EIL2 [Lycopersicon esculentum]
915.0 [0..1] [628..2]
gi|15425733 - gi|15425733|dbj|BAB64344.1| EIN3-like protein [Cucumis melo]
914.0 [0..1] [608..3]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM  60
   61 RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL KYMLKMMEVC KAQGFVYGII 120
  121 PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.619789
Match: PF04873.4
Description: No description for PF04873.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [171-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGPTPHTLQE LQDTTLGSLL SALMQHCDPP QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK  60
   61 DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA 120
  121 IINQEESLAR ELYPE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.69897
Match: 1wijA
Description: Solution Structure of the DNA-Binding Domain of Ethylene-Insensitive3-Like3
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [306-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SCPPLSLSGG SCSLLMNDCS QYDVEGFEKE SHYEVEELKP EKVMNSSNFG MVAKMHDFPV  60
   61 KEEVPAGNSE FMRKRKPNRD LNTIMDRTVF TCENLGCAHS EISRGFLDRN SRDNHQLACP 120
  121 HRDSRLPYGA A

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [437-628]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSRFHVNEVK PVVGFPQPRP VNSVAQPIDL TGIVPEDGQK MISELMSMYD RNVQSNQTSM  60
   61 VMENQSVSLL QPTVHNHQEH LQFPGNMVEG SFFEDLNIPN RANNNNSSNN QTFFQGNNNN 120
  121 NNVFKFDTAD HNNFEAAHNN NNNSSGNRFQ LVFDSTPFDM ASFDYRDDMS MPGVVGTMDG 180
  181 MQQKQQDVSI WF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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